Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813408.1_cds_XP_016497516.1_11634
CDS Infomation

[gene=LOC107816334] [db_xref=GeneID:107816334] [protein=protein NRT1/ PTR FAMILY 4.5-like] [protein_id=XP_016497516.1] [location=complement(join(35704..36733,37418..37542,37668..38087,38802..39019,39110..39197,39281..39307))] [gbkey=CDS]
Sequence

ATGGTAAGTGCTCGCTTTCCATTTTCTGAGGAGGGTAAAAGCACAGAGTATAATTCTATG
ACTTCAAGCAAAACTAAAGGAAAAGGTGGATTTAGAGCTACCACCTTCATCTATGGTTTG
TTAGGATTAGAAAACATGGGGTTTATTGCAATCATGGTGAGTTTTGGATTATACTTCAGT
TTTGTGATGGGATTTGACCTCACTGGCTCAGCTAATACTCTCACTAACTTGATGGGCTCA
ACCTTCTTGCTCTCCATTCTTGGTGGCTTCATTTCTGATACTTACATCAACAGATACCAT
ACTGTCCTAATTTTTGGACCCTTCGAAATTCTAGCATTTGCATTGATAACAATTCAAGCT
CATTACAAGAGTTTGCAACCAGAATGTGTGGTGCCAAATTGCATATCAGGATGGAAAGCT
GTGTTCTTCTATGCATCACTTTGCTGCTTTGCATTGGGGAGTGGTGGGGTTAGGGGTGCA
TTGCCAGCATTGGGTGCTGACCAATTTGATCAGAAGGATCCAAAAGAGGCTAAGGCTCTT
GGAAGATACTTCAATTTGGTATTGCTTAGTTCTGTGATTGGTGGAGCTTTTGGAGTTACG
TTTGTTGTCTATGTCAGTACAGTTAAAGCTTGGTGGAAAGGTTTTCTCATCAGTTTGGTT
GCTACTTCACTTGGTTTTGTTTTCTTTGCCTTTGGAAAACCTTTCTTGCGCCTTCAACGT
CCTGCTGGAAGCCCTCTTACTAGAATTTTCCAGGTTATCGTTGTAGCAATCGAAAACCGA
AATTTGCAAATACCAGAAAATATTGACGAGCTGTATGAGATTAATGATAAAGAATCAGAC
TCGTCACAGCAAAAACTTGCACATACTAAACAATTCAGATTCTTAGACAAAGCTGCAATC
CTTCCTAAAACTGTTGAAGCCACTCCATGGACAGTTTGCACTGTGACACAAGTTGAAGAA
GTGAAAGTGTTAACAAGAATGTTGCCTATCATAGCTAGTACAATTATAATGAATACATGT
ATGGCCCAACTCCAAACATTCTCAGTTGCACAAGGCTATCGAATGAACCGTTTCATTAAA
AAGTTCGAGGTACCAGCACCTTCAGTGCCCGCTATTCCATTAATCTTTATGTGTATTCTC
ATCCCAATTTATGACATGTTCTTCGTCCCCTTTGCTCGAAAAATCACCAAACATCCCTCA
GGCATCACTCAACTCCAACGTGTTGGGGTCGGACTAGTCCTATCGATCGTGTCCATGGCT
GTTGCTGCCCTAGTTGAGATCAAAAGAAAGCACCATTCCTTGAAAAATCCTTTGAAGCCT
ATTCATCTAGCTTGGCTAGGATTTCAATATGCTATTTTTGGAATAGCTGACATGTTTACC
TTAGTGGGCCTGCTTGAATTTTTCTACAAAGAAGCACCTGCTGGAATGAGGTCCTTATCC
ACTTCATTTACATGGATTTCAATTTCTTTGGGCTACTTCTTGAGTAGCGTCCTTGTAGAA
ATCATCAATTCAGTGACAAAAAGAAGAGCACCAAGCAAGAAAGGATGGTTAGTGGGCTTA
GACTTAGATCAGAATAATTTGCACCTCTTCTATTGGTTCTTGGCTATTCTTAGTGGGCTC
AACTTTCTGAACTACCTCTTTTGGGCCTCTTGGTACAAATACAAAACAGATGAAATTGAA
GAGCCCAAGCCCAATATAGATGATTCAATCAGCTTGTCCAAATCAGTGTCTGTGAGTAGG
GTGCCATTGCTTAAGCCCAGTGACAATGCATCAGCAATGCCTATAATTGAAGAATGCTCC
AATGGGCACACTGAGGAAGGTAATGAAAATTCATCAGCAGTGCCTAAAATAGAAGCAGCA
TCCTCTAGTGGACACCCTGAGGGAACTGAGAAGAATGCCCACAGTTGA

Peptide Sequence

PEP ID

XP_016497516.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 4.5-like [Nicotiana tabacum]
Sequence

MVSARFPFSEEGKSTEYNSMTSSKTKGKGGFRATTFIYGLLGLENMGFIAIMVSFGLYFS
FVMGFDLTGSANTLTNLMGSTFLLSILGGFISDTYINRYHTVLIFGPFEILAFALITIQA
HYKSLQPECVVPNCISGWKAVFFYASLCCFALGSGGVRGALPALGADQFDQKDPKEAKAL
GRYFNLVLLSSVIGGAFGVTFVVYVSTVKAWWKGFLISLVATSLGFVFFAFGKPFLRLQR
PAGSPLTRIFQVIVVAIENRNLQIPENIDELYEINDKESDSSQQKLAHTKQFRFLDKAAI
LPKTVEATPWTVCTVTQVEEVKVLTRMLPIIASTIIMNTCMAQLQTFSVAQGYRMNRFIK
KFEVPAPSVPAIPLIFMCILIPIYDMFFVPFARKITKHPSGITQLQRVGVGLVLSIVSMA
VAALVEIKRKHHSLKNPLKPIHLAWLGFQYAIFGIADMFTLVGLLEFFYKEAPAGMRSLS
TSFTWISISLGYFLSSVLVEIINSVTKRRAPSKKGWLVGLDLDQNNLHLFYWFLAILSGL
NFLNYLFWASWYKYKTDEIEEPKPNIDDSISLSKSVSVSRVPLLKPSDNASAMPIIEECS
NGHTEEGNENSSAVPKIEAASSSGHPEGTEKNAHS

Transcript Sequence

Gene sequence data has not been registered.